Differences

This shows you the differences between two versions of the page.

--- en:hpc [2024/02/21 12:45] – [Singularity] rolnas
+++ en:hpc [2024/02/21 12:50] (current) – [Singularity] rolnas
@@ Line 31: / Line 31: @@
 $ rm -rf /tmp/python
 </code>
+To use this container, it is advised to use different directory instead of home directory (for python packages don't mixup with installed to home directory).
+<code shell>
+$ mkdir ~/workdir
+$ singularity exec -H ~/workdir:$HOME python.sif python3 ...
+</code>
 Similarly, you can use R, Julia or other containers that do not require root privileges to install packages.
@@ Line 45: / Line 53: @@
 </code>
-==== Hadoop ====
+===== Hadoop =====
 There are ready-made scripts to run your **hadoop** tasks using the [[https://github.com/LLNL/magpie|Magpie]] set in the directory ''/apps/local/bigdata''.
-==== JupyterHub ====
+===== JupyterHub =====
 With [[https://hpc.mif.vu.lt/hub/|JupyterHub]] you can run calculations with the python command line in a web browser and use the [[https://jupyter.org|JupyterLab]] environment. If you install your own JupyterLab environment in your home directory, you need to install the additional ''batchspawner'' package - this will start your environment, for example: