en:hpc
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en:hpc [2022/04/14 13:33] – grikiete | en:hpc [2022/04/15 06:09] – [Software] grikiete | ||
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====== Software ====== | ====== Software ====== | ||
- | **main** and **gpu** are installed [[https:// | + | In **main** and **gpu** |
- | You can check the list of OS package with the command '' | + | You can check the list of OS package with the command '' |
- | Su komanda | + | With the command |
- | Su singularity | + | With singularity |
<code shell> | <code shell> | ||
$ singularity build --sandbox /tmp/python docker:// | $ singularity build --sandbox /tmp/python docker:// | ||
- | $ singularity exec -w /tmp/python pip install | + | $ singularity exec -w /tmp/python pip install |
$ singularity build python.sif /tmp/python | $ singularity build python.sif /tmp/python | ||
$ rm -rf /tmp/python | $ rm -rf /tmp/python | ||
</ | </ | ||
- | Analogiškai galima pasinaudoti | + | Similarly, you can use R, Julia or other containers that do not require |
- | Jeigu norima papildyti singularity kontainerį | + | If you want to add OS packages to the singularity container, you need root/ |
<code shell> | <code shell> | ||
$ singularity build --sandbox /tmp/python docker:// | $ singularity build --sandbox /tmp/python docker:// | ||
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$ fakeroot -l / | $ fakeroot -l / | ||
$ fakeroot -l / | $ fakeroot -l / | ||
- | $ rm -rf / | + | $ rm -rf / |
$ singularity build python.sif /tmp/python | $ singularity build python.sif /tmp/python | ||
$ rm -rf /tmp/python | $ rm -rf /tmp/python | ||
</ | </ | ||
- | Kataloge ''/ | + | There are ready-made scripts to run your **hadoop** |
- | Su [[https:// | + | With [[https:// |
<code shell> | <code shell> | ||
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</ | </ | ||
- | Taip pat jūs galite pasinaudoti savo pasidarytu konteineriu per JupyterHub. | + | Alternatively, |
<code shell> | <code shell> | ||
#!/bin/sh | #!/bin/sh | ||
exec singularity exec --nv myjupyterlab.sif batchspawner-singleuser " | exec singularity exec --nv myjupyterlab.sif batchspawner-singleuser " | ||
</ | </ |
en/hpc.txt · Last modified: 2024/02/21 12:50 by rolnas